IL_7PKQ_004
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CUAG*CGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PKQ_004 not in the Motif Atlas
- Geometric match to IL_4K27_001
- Geometric discrepancy: 0.2583
- The information below is about IL_4K27_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
7PKQ|1|2|C|7
7PKQ|1|2|U|8
7PKQ|1|2|A|9
7PKQ|1|2|G|10
*
7PKQ|1|2|C|29
7PKQ|1|2|G|30
7PKQ|1|2|G|31
7PKQ|1|2|G|32
Current chains
- Chain 2
- S2 rRNA
Nearby chains
- Chain 1
- S1 rRNA
- Chain P
- mS107
- Chain p
- bS16m
- Chain w
- mS26
Coloring options: