IL_7PKQ_055
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GAACA*UCACU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PKQ_055 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3136
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
7PKQ|1|3|G|108
7PKQ|1|3|A|109
7PKQ|1|3|A|110
7PKQ|1|3|C|111
7PKQ|1|3|A|112
*
7PKQ|1|3|U|199
7PKQ|1|3|C|200
7PKQ|1|3|A|201
7PKQ|1|3|C|202
7PKQ|1|3|U|203
Current chains
- Chain 3
- S3 rRNA
Nearby chains
- Chain h
- uS8m
- Chain o
- uS15m
- Chain q
- uS17m
- Chain w
- mS26
Coloring options: