IL_7PNX_028
3D structure
- PDB id
- 7PNX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- AUAUC*GCCCU
- Length
- 10 nucleotides
- Bulged bases
- 7PNX|1|A|U|1187, 7PNX|1|A|A|1188, 7PNX|1|A|U|1189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PNX_028 not in the Motif Atlas
- Geometric match to IL_5J7L_291
- Geometric discrepancy: 0.1972
- The information below is about IL_5J7L_291
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
7PNX|1|A|A|1186
7PNX|1|A|U|1187
7PNX|1|A|A|1188
7PNX|1|A|U|1189
7PNX|1|A|C|1190
*
7PNX|1|A|G|1464
7PNX|1|A|C|1465
7PNX|1|A|C|1466
7PNX|1|A|C|1467
7PNX|1|A|U|1468
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain b
- 12S rRNA N4-methylcytidine (m4C) methyltransferase
Coloring options: