IL_7PNY_009
3D structure
- PDB id
- 7PNY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- GCAC*GC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PNY_009 not in the Motif Atlas
- Geometric match to IL_1NTA_003
- Geometric discrepancy: 0.1936
- The information below is about IL_1NTA_003
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.3
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 36
Unit IDs
7PNY|1|A|G|762
7PNY|1|A|C|763
7PNY|1|A|A|764
7PNY|1|A|C|765
*
7PNY|1|A|G|777
7PNY|1|A|C|778
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain 3
- Aurora kinase A-interacting protein
- Chain L
- 28S ribosomal protein S15, mitochondrial
- Chain N
- 28S ribosomal protein S17, mitochondrial
Coloring options: