IL_7PO1_045

3D structure

PDB id

7PO1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of human mitochondrial ribosome small subunit with IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UC*GCA

Length

5 nucleotides

Bulged bases

7PO1|1|A|C|1539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PO1_045 not in the Motif Atlas

Geometric match to IL_5J7L_311

Geometric discrepancy: 0.3633

The information below is about IL_5J7L_311

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.15

Basepair signature

cWW-L-cWW

Number of instances in this motif group

41

Unit IDs

7PO1|1|A|U|1510
7PO1|1|A|C|1511
*
7PO1|1|A|G|1538
7PO1|1|A|C|1539
7PO1|1|A|A|1540

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain 3

Aurora kinase A-interacting protein