3D structure

PDB id
7PO2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
UGGUCAAUUU*AUUA
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PO2|1|A|U|876
7PO2|1|A|G|877
7PO2|1|A|G|878
7PO2|1|A|U|879
7PO2|1|A|C|880
7PO2|1|A|A|881
7PO2|1|A|A|882
7PO2|1|A|U|883
7PO2|1|A|U|884
7PO2|1|A|U|885
*
7PO2|1|A|A|910
7PO2|1|A|U|911
7PO2|1|A|U|912
7PO2|1|A|A|913

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 6
mRNA
Chain D
28S ribosomal protein S5, mitochondrial
Chain J
28S ribosomal protein S12, mitochondrial
Chain O
28S ribosomal protein S18b, mitochondrial
Chain Z
28S ribosomal protein S33, mitochondrial

Coloring options:

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