IL_7PO2_021

3D structure

PDB id

7PO2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

ACC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PO2_021 not in the Motif Atlas

Geometric match to IL_4LFB_010

Geometric discrepancy: 0.1202

The information below is about IL_4LFB_010

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

7PO2|1|A|A|982
7PO2|1|A|C|983
7PO2|1|A|C|984
*
7PO2|1|A|G|1004
7PO2|1|A|U|1005
7PO2|1|A|U|1006

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain E

28S ribosomal protein S6, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial