3D structure

PDB id
7PO2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
AUCACCCCCUCCCCAAU*AACAUAU
Length
24 nucleotides
Bulged bases
7PO2|1|A|C|954, 7PO2|1|A|U|961, 7PO2|1|A|A|966, 7PO2|1|A|A|1041
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PO2|1|A|A|952
7PO2|1|A|U|953
7PO2|1|A|C|954
7PO2|1|A|A|955
7PO2|1|A|C|956
7PO2|1|A|C|957
7PO2|1|A|C|958
7PO2|1|A|C|959
7PO2|1|A|C|960
7PO2|1|A|U|961
7PO2|1|A|C|962
7PO2|1|A|C|963
7PO2|1|A|C|964
7PO2|1|A|C|965
7PO2|1|A|A|966
7PO2|1|A|A|967
7PO2|1|A|U|968
*
7PO2|1|A|A|1036
7PO2|1|A|A|1037
7PO2|1|A|C|1038
7PO2|1|A|A|1039
7PO2|1|A|U|1040
7PO2|1|A|A|1041
7PO2|1|A|U|1042

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 2
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
Chain E
28S ribosomal protein S6, mitochondrial
Chain J
28S ribosomal protein S12, mitochondrial
Chain L
28S ribosomal protein S15, mitochondrial
Chain N
28S ribosomal protein S17, mitochondrial
Chain P
28S ribosomal protein S18c, mitochondrial
Chain Q
28S ribosomal protein S21, mitochondrial
Chain S
28S ribosomal protein S23, mitochondrial
Chain T
28S ribosomal protein S25, mitochondrial
Chain U
28S ribosomal protein S26, mitochondrial

Coloring options:

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