IL_7PO4_031
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CCCUGUAC*GGACAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PO4_031 not in the Motif Atlas
- Geometric match to IL_1JBR_001
- Geometric discrepancy: 0.2474
- The information below is about IL_1JBR_001
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
7PO4|1|A|C|3119
7PO4|1|A|C|3120
7PO4|1|A|C|3121
7PO4|1|A|U|3122
7PO4|1|A|G|3123
7PO4|1|A|U|3124
7PO4|1|A|A|3125
7PO4|1|A|C|3126
*
7PO4|1|A|G|3131
7PO4|1|A|G|3132
7PO4|1|A|A|3133
7PO4|1|A|C|3134
7PO4|1|A|A|3135
7PO4|1|A|A|3136
7PO4|1|A|G|3137
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain za
- Mitochondrial assembly of ribosomal large subunit protein 1
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