IL_7PO4_038
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CCUAUG*CUAGG
- Length
- 11 nucleotides
- Bulged bases
- 7PO4|1|A|U|2731
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PO4_038 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3705
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PO4|1|A|C|2727
7PO4|1|A|C|2728
7PO4|1|A|U|2729
7PO4|1|A|A|2730
7PO4|1|A|U|2731
7PO4|1|A|G|2732
*
7PO4|1|A|C|2929
7PO4|1|A|U|2930
7PO4|1|A|A|2931
7PO4|1|A|G|2932
7PO4|1|A|G|2933
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
Coloring options: