IL_7PWG_026
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCGCU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_026 not in the Motif Atlas
- Homologous match to IL_5TBW_040
- Geometric discrepancy: 0.2459
- The information below is about IL_5TBW_040
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
7PWG|1|1|G|713
7PWG|1|1|C|714
7PWG|1|1|G|715
7PWG|1|1|C|716
7PWG|1|1|U|717
*
7PWG|1|1|A|758
7PWG|1|1|A|759
7PWG|1|1|A|760
7PWG|1|1|C|761
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain D
- Ribosomal protein L5
- Chain I
- Ribosomal protein L10
- Chain T
- Ribosomal protein L21
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