IL_7PWG_029
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CCAGG*CCGCG
- Length
- 10 nucleotides
- Bulged bases
- 7PWG|1|1|C|1030
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_029 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.2622
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7PWG|1|1|C|876
7PWG|1|1|C|877
7PWG|1|1|A|878
7PWG|1|1|G|879
7PWG|1|1|G|880
*
7PWG|1|1|C|1027
7PWG|1|1|C|1028
7PWG|1|1|G|1029
7PWG|1|1|C|1030
7PWG|1|1|G|1031
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain F
- Ribosomal protein L7
- Chain Q
- Ribosomal protein L18
- Chain e
- Ribosomal protein L32
- Chain f
- Ribosomal protein L35a
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