IL_7PWG_100
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- AACUC*GAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWG_100 not in the Motif Atlas
- Geometric match to IL_7RQB_114
- Geometric discrepancy: 0.2013
- The information below is about IL_7RQB_114
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.6
- Basepair signature
- cWW-cWS-L-tSW-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
7PWG|1|3|A|32
7PWG|1|3|A|33
7PWG|1|3|C|34
7PWG|1|3|U|35
7PWG|1|3|C|36
*
7PWG|1|3|G|42
7PWG|1|3|A|43
7PWG|1|3|A|44
7PWG|1|3|U|45
7PWG|1|3|U|46
Current chains
- Chain 3
- rRNA 5S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Ribosomal protein L5
- Chain J
- Ribosomal protein L11
Coloring options: