IL_7PWO_013

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CCCGAG*CGCGG

Length

11 nucleotides

Bulged bases

7PWO|1|1|C|428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|426
7PWO|1|1|C|427
7PWO|1|1|C|428
7PWO|1|1|G|429
7PWO|1|1|A|430
7PWO|1|1|G|431
*
7PWO|1|1|C|440
7PWO|1|1|G|441
7PWO|1|1|C|442
7PWO|1|1|G|443
7PWO|1|1|G|444

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain C2

Ribosomal protein L4

Chain L2

60S ribosomal protein L13

Chain N2

Ribosomal protein L15

Chain Q2

Ribosomal protein L18

Chain a2

Ribosomal protein L27a