IL_7PWO_018
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGAGG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_018 not in the Motif Atlas
- Geometric match to IL_3MXH_002
- Geometric discrepancy: 0.3523
- The information below is about IL_3MXH_002
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
7PWO|1|1|C|550
7PWO|1|1|G|551
7PWO|1|1|A|552
7PWO|1|1|G|553
7PWO|1|1|G|554
*
7PWO|1|1|U|571
7PWO|1|1|G|572
7PWO|1|1|G|573
7PWO|1|1|A|574
7PWO|1|1|G|575
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain A2
- Ribosomal protein L2
- Chain R2
- Ribosomal protein L19
- Chain p2
- Ribosomal protein L37a
Coloring options: