IL_7PWO_032
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- 7PWO|1|1|C|907
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_032 not in the Motif Atlas
- Homologous match to IL_5TBW_053
- Geometric discrepancy: 0.1964
- The information below is about IL_5TBW_053
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7PWO|1|1|G|906
7PWO|1|1|C|907
7PWO|1|1|G|908
*
7PWO|1|1|C|995
7PWO|1|1|C|996
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain H2
- Ribosomal protein L6
- Chain I2
- Ribosomal protein L10
- Chain S2
- 60S ribosomal protein L18a
- Chain m2
- Ubiquitin/Ribosomal protein L40e
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