IL_7PWO_062

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

C(5MC)AA(A2M)UGCCUC(OMG)U*ACGG

Length

17 nucleotides

Bulged bases

7PWO|1|1|C|1774

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|1764
7PWO|1|1|5MC|1765
7PWO|1|1|A|1766
7PWO|1|1|A|1767
7PWO|1|1|A2M|1768
7PWO|1|1|U|1769
7PWO|1|1|G|1770
7PWO|1|1|C|1771
7PWO|1|1|C|1772
7PWO|1|1|U|1773
7PWO|1|1|C|1774
7PWO|1|1|OMG|1775
7PWO|1|1|U|1776
*
7PWO|1|1|A|1790
7PWO|1|1|C|1791
7PWO|1|1|G|1792
7PWO|1|1|G|1794

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain n1

Ribosomal protein eL41