IL_7PWO_069
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CAG*CGGG
- Length
- 7 nucleotides
- Bulged bases
- 7PWO|1|1|G|2029
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_069 not in the Motif Atlas
- Homologous match to IL_5TBW_095
- Geometric discrepancy: 0.2291
- The information below is about IL_5TBW_095
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
7PWO|1|1|C|1910
7PWO|1|1|A|1911
7PWO|1|1|G|1912
*
7PWO|1|1|C|2027
7PWO|1|1|G|2028
7PWO|1|1|G|2029
7PWO|1|1|G|2030
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain A2
- Ribosomal protein L2
- Chain N2
- Ribosomal protein L15
- Chain o2
- Ribosomal protein L44
- Chain w2
- E-site tRNA
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