IL_7PWO_105

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAAGGG*UGACG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|C|163
7PWO|1|2|A|164
7PWO|1|2|A|165
7PWO|1|2|G|166
7PWO|1|2|G|167
7PWO|1|2|G|168
*
7PWO|1|2|U|192
7PWO|1|2|G|193
7PWO|1|2|A|194
7PWO|1|2|C|195
7PWO|1|2|G|196

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain E1

40S ribosomal protein S4

Chain I1

40S ribosomal protein S8

Chain L1

SSU ribosomal protein S17P