IL_7PWO_106

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GGGCCCCGG*CAGC

Length

13 nucleotides

Bulged bases

7PWO|1|2|C|173, 7PWO|1|2|G|180

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|G|170
7PWO|1|2|G|171
7PWO|1|2|G|172
7PWO|1|2|C|173
7PWO|1|2|C|175
7PWO|1|2|C|176
7PWO|1|2|C|177
7PWO|1|2|G|180
7PWO|1|2|G|181
*
7PWO|1|2|C|187
7PWO|1|2|A|188
7PWO|1|2|G|189
7PWO|1|2|C|190

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain E1

40S ribosomal protein S4

Chain G1

40S ribosomal protein S6

Chain I1

40S ribosomal protein S8

Chain L1

SSU ribosomal protein S17P