IL_7PWO_113

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAGGGCAAGG*CUCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|C|429
7PWO|1|2|A|430
7PWO|1|2|G|431
7PWO|1|2|G|432
7PWO|1|2|G|433
7PWO|1|2|C|434
7PWO|1|2|A|435
7PWO|1|2|A|436
7PWO|1|2|G|437
7PWO|1|2|G|438
*
7PWO|1|2|C|468
7PWO|1|2|U|469
7PWO|1|2|C|470
7PWO|1|2|G|471

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain C1

Ribosomal protein S2

Chain J1

Ribosomal protein S9

Chain X1

Ribosomal protein S23

Chain e1

40S ribosomal protein S30