IL_7PWO_121

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GGAG*CAGGUUGGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|G|540
7PWO|1|2|G|541
7PWO|1|2|A|542
7PWO|1|2|G|543
*
7PWO|1|2|C|553
7PWO|1|2|A|554
7PWO|1|2|G|555
7PWO|1|2|G|556
7PWO|1|2|U|561
7PWO|1|2|U|562
7PWO|1|2|G|563
7PWO|1|2|G|564
7PWO|1|2|A|565
7PWO|1|2|C|566

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain E1

40S ribosomal protein S4

Chain J1

Ribosomal protein S9

Chain Y1

Ribosomal protein S24