IL_7PWO_131
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGGCUA*UUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_131 not in the Motif Atlas
- Homologous match to IL_4V88_435
- Geometric discrepancy: 0.1524
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7PWO|1|2|G|737
7PWO|1|2|G|738
7PWO|1|2|G|739
7PWO|1|2|C|740
7PWO|1|2|U|741
7PWO|1|2|A|742
*
7PWO|1|2|U|766
7PWO|1|2|U|767
7PWO|1|2|C|768
Current chains
- Chain 2
- rRNA 18S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain A2
- Ribosomal protein L2
- Chain O1
- Ribosomal protein S14
- Chain a1
- 40S ribosomal protein S26
Coloring options: