IL_7PWO_132
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- AGAAG*CGUAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_132 not in the Motif Atlas
- Geometric match to IL_5J7L_037
- Geometric discrepancy: 0.0868
- The information below is about IL_5J7L_037
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7PWO|1|2|A|742
7PWO|1|2|G|743
7PWO|1|2|A|744
7PWO|1|2|A|745
7PWO|1|2|G|746
*
7PWO|1|2|C|762
7PWO|1|2|G|763
7PWO|1|2|U|764
7PWO|1|2|A|765
7PWO|1|2|U|766
Current chains
- Chain 2
- rRNA 18S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain A2
- Ribosomal protein L2
- Chain O1
- Ribosomal protein S14
- Chain a1
- 40S ribosomal protein S26
Coloring options: