IL_7PWO_174
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GAUC*GUC
- Length
- 7 nucleotides
- Bulged bases
- 7PWO|1|3|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_174 not in the Motif Atlas
- Geometric match to IL_4KQ0_003
- Geometric discrepancy: 0.219
- The information below is about IL_4KQ0_003
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 61
Unit IDs
7PWO|1|3|G|83
7PWO|1|3|A|84
7PWO|1|3|U|85
7PWO|1|3|C|86
*
7PWO|1|3|G|93
7PWO|1|3|U|94
7PWO|1|3|C|95
Current chains
- Chain 3
- rRNA 5S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain F2
- Ribosomal protein L7
- Chain I2
- Ribosomal protein L10
- Chain S2
- 60S ribosomal protein L18a
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