IL_7PWO_176

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CGAAG*CGCUGUG

Length

12 nucleotides

Bulged bases

7PWO|1|1|U|126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|115
7PWO|1|1|G|116
7PWO|1|1|A|117
7PWO|1|1|A|118
7PWO|1|1|G|119
*
7PWO|1|1|C|123
7PWO|1|1|G|124
7PWO|1|1|C|125
7PWO|1|1|U|126
7PWO|1|1|G|127
7PWO|1|1|U|128
7PWO|1|1|G|129

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain 42

rRNA 5.8S

Chain G2

60S ribosomal protein L7a

Chain N2

Ribosomal protein L15

Chain h2

Ribosomal protein L35