IL_7PWO_180
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGAAGUCGG*CUGU(OMC)
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_180 not in the Motif Atlas
- Homologous match to IL_8P9A_305
- Geometric discrepancy: 0.0802
- The information below is about IL_8P9A_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
7PWO|1|1|G|1529
7PWO|1|1|G|1530
7PWO|1|1|A|1531
7PWO|1|1|A|1532
7PWO|1|1|G|1533
7PWO|1|1|U|1534
7PWO|1|1|C|1535
7PWO|1|1|G|1536
7PWO|1|1|G|1537
*
7PWO|1|1|C|1820
7PWO|1|1|U|1821
7PWO|1|1|G|1822
7PWO|1|1|U|1823
7PWO|1|1|OMC|1824
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain B2
- Ribosomal protein L3
- Chain V2
- Ribosomal protein L23
Coloring options: