IL_7PZY_041
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GCGAAU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 7PZY|1|1|G|997
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_041 not in the Motif Atlas
- Homologous match to IL_8C3A_043
- Geometric discrepancy: 0.0652
- The information below is about IL_8C3A_043
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
7PZY|1|1|G|995
7PZY|1|1|C|996
7PZY|1|1|G|997
7PZY|1|1|A|998
7PZY|1|1|A|999
7PZY|1|1|U|1000
*
7PZY|1|1|A|1042
7PZY|1|1|A|1043
7PZY|1|1|A|1044
7PZY|1|1|C|1045
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain m
- Ribosomal 60S subunit protein L5
- Chain r
- Ribosomal 60S subunit protein L10
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