IL_7PZY_051
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- UGCCGGAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_051 not in the Motif Atlas
- Geometric match to IL_4V9F_038
- Geometric discrepancy: 0.1275
- The information below is about IL_4V9F_038
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.1
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
7PZY|1|1|U|1169
7PZY|1|1|G|1170
7PZY|1|1|C|1171
7PZY|1|1|C|1172
7PZY|1|1|G|1173
7PZY|1|1|G|1174
7PZY|1|1|A|1175
7PZY|1|1|A|1176
*
7PZY|1|1|U|1321
7PZY|1|1|A|1322
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AG
- Ribosomal 60S subunit protein L33A
- Chain o
- Ribosomal 60S subunit protein L7A
- Chain w
- Ribosomal 60S subunit protein L16A
Coloring options: