IL_7PZY_070

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

7PZY|1|1|U|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_070 not in the Motif Atlas

Geometric match to IL_5TBW_066

Geometric discrepancy: 0.11

The information below is about IL_5TBW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7PZY|1|1|U|1623
7PZY|1|1|C|1624
7PZY|1|1|U|1625
7PZY|1|1|U|1626
7PZY|1|1|C|1627
*
7PZY|1|1|G|1807
7PZY|1|1|G|1808
7PZY|1|1|A|1809
7PZY|1|1|A|1810
7PZY|1|1|U|1811
7PZY|1|1|A|1812

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L27