IL_7PZY_160
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7PZY|1|A|U|168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_160 not in the Motif Atlas
- Geometric match to IL_4V88_394
- Geometric discrepancy: 0.0959
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
7PZY|1|A|G|141
7PZY|1|A|G|142
7PZY|1|A|A|143
7PZY|1|A|U|144
7PZY|1|A|A|145
7PZY|1|A|A|146
7PZY|1|A|C|147
*
7PZY|1|A|G|163
7PZY|1|A|C|164
7PZY|1|A|U|165
7PZY|1|A|A|166
7PZY|1|A|A|167
7PZY|1|A|U|168
7PZY|1|A|A|169
7PZY|1|A|C|170
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S6
- Chain Z
- 40S ribosomal protein S24
Coloring options: