IL_7PZY_171
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 7PZY|1|A|U|378
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_171 not in the Motif Atlas
- Geometric match to IL_4V88_404
- Geometric discrepancy: 0.0637
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7PZY|1|A|G|361
7PZY|1|A|G|362
7PZY|1|A|G|363
*
7PZY|1|A|C|374
7PZY|1|A|G|375
7PZY|1|A|A|376
7PZY|1|A|U|377
7PZY|1|A|U|378
7PZY|1|A|C|379
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain K
- Ribosomal 40S subunit protein S9B
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: