IL_7PZY_186
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- AC*GAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_186 not in the Motif Atlas
- Geometric match to IL_4V88_423
- Geometric discrepancy: 0.1777
- The information below is about IL_4V88_423
- Detailed Annotation
- Major groove minor groove platform; mini C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_68140.1
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 19
Unit IDs
7PZY|1|A|A|731
7PZY|1|A|C|732
*
7PZY|1|A|G|786
7PZY|1|A|A|787
7PZY|1|A|A|788
7PZY|1|A|U|789
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain I
- 40S ribosomal protein S7
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain X
- 40S ribosomal protein S22-A
- Chain Y
- Ribosomal 40S subunit protein S23B
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