IL_7PZY_210

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

ACA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_210 not in the Motif Atlas

Homologous match to IL_8C3A_454

Geometric discrepancy: 0.1516

The information below is about IL_8C3A_454

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10167.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

49

Unit IDs

7PZY|1|A|A|1219
7PZY|1|A|C|1220
7PZY|1|A|A|1221
*
7PZY|1|A|U|1234
7PZY|1|A|U|1235
7PZY|1|A|U|1236

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain e

Ribosomal 40S subunit protein S29A

Chain g

Ubiquitin-ribosomal 40S subunit protein S31 fusion protein