IL_7PZY_225

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7PZY|1|A|C|1624, 7PZY|1|A|A|1753

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_225 not in the Motif Atlas

Geometric match to IL_4V88_463

Geometric discrepancy: 0.0915

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7PZY|1|A|C|1623
7PZY|1|A|C|1624
7PZY|1|A|G|1625
*
7PZY|1|A|C|1751
7PZY|1|A|A|1752
7PZY|1|A|A|1753
7PZY|1|A|G|1754

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain b

40S ribosomal protein S26

Chain i

HABP4_PAI-RBP1 domain-containing protein