IL_7PZY_243

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

UUC*GGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_243 not in the Motif Atlas

Homologous match to IL_8C3A_435

Geometric discrepancy: 0.177

The information below is about IL_8C3A_435

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

7PZY|1|A|U|810
7PZY|1|A|U|811
7PZY|1|A|C|812
*
7PZY|1|A|G|830
7PZY|1|A|G|831
7PZY|1|A|A|832

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain M

Ribosomal 40S subunit protein S11A