IL_7Q08_004
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CUGAACUU*AUCAAUAAG
- Length
- 17 nucleotides
- Bulged bases
- 7Q08|1|1|A|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q08_004 not in the Motif Atlas
- Geometric match to IL_5TBW_005
- Geometric discrepancy: 0.0617
- The information below is about IL_5TBW_005
- Detailed Annotation
- tSH-tHW-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_35728.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7Q08|1|1|C|30
7Q08|1|1|U|31
7Q08|1|1|G|32
7Q08|1|1|A|33
7Q08|1|1|A|34
7Q08|1|1|C|35
7Q08|1|1|U|36
7Q08|1|1|U|37
*
7Q08|1|1|A|44
7Q08|1|1|U|45
7Q08|1|1|C|46
7Q08|1|1|A|47
7Q08|1|1|A|48
7Q08|1|1|U|49
7Q08|1|1|A|50
7Q08|1|1|A|51
7Q08|1|1|G|52
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AB
- Ribosomal 60S subunit protein L28
- Chain AK
- Ribosomal protein L37
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain t
- 60S ribosomal protein L13
- Chain v
- Ribosomal protein L15
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