IL_7Q08_024

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

7Q08|1|1|A|776

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_024 not in the Motif Atlas

Homologous match to IL_8C3A_026

Geometric discrepancy: 0.0693

The information below is about IL_8C3A_026

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7Q08|1|1|C|748
7Q08|1|1|C|749
*
7Q08|1|1|G|775
7Q08|1|1|A|776
7Q08|1|1|G|777

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AB

Ribosomal 60S subunit protein L28

Chain y

Ribosomal 60S subunit protein L18A