IL_7Q08_092

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CCAG*CG

Length

6 nucleotides

Bulged bases

7Q08|1|1|C|2175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_092 not in the Motif Atlas

Homologous match to IL_8C3A_089

Geometric discrepancy: 0.0867

The information below is about IL_8C3A_089

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_88739.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7Q08|1|1|C|2174
7Q08|1|1|C|2175
7Q08|1|1|A|2176
7Q08|1|1|G|2177
*
7Q08|1|1|C|2223
7Q08|1|1|G|2224

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain j

Ribosomal 60S subunit protein L2A