IL_7Q08_102

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7Q08|1|1|A|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_102 not in the Motif Atlas

Homologous match to IL_8C3A_099

Geometric discrepancy: 0.0665

The information below is about IL_8C3A_099

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7Q08|1|1|G|2390
7Q08|1|1|A|2391
*
7Q08|1|1|U|2779
7Q08|1|1|A|2780
7Q08|1|1|C|2781
7Q08|1|1|C|2782

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain j

Ribosomal 60S subunit protein L2A