IL_7Q08_103

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

7Q08|1|1|G|2578

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_103 not in the Motif Atlas

Homologous match to IL_8C3A_100

Geometric discrepancy: 0.0745

The information below is about IL_8C3A_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

7Q08|1|1|U|2401
7Q08|1|1|A|2402
7Q08|1|1|G|2403
*
7Q08|1|1|U|2576
7Q08|1|1|G|2577
7Q08|1|1|G|2578
7Q08|1|1|G|2579

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AP

Ribosomal 60S subunit protein L42A

Chain j

Ribosomal 60S subunit protein L2A

Chain v

Ribosomal protein L15