IL_7Q08_126

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CU*AACG

Length

6 nucleotides

Bulged bases

7Q08|1|1|A|3050, 7Q08|1|1|C|3051

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_126 not in the Motif Atlas

Homologous match to IL_8C3A_128

Geometric discrepancy: 0.0727

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7Q08|1|1|C|3035
7Q08|1|1|U|3036
*
7Q08|1|1|A|3049
7Q08|1|1|A|3050
7Q08|1|1|C|3051
7Q08|1|1|G|3052

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AE

Ribosomal 60S subunit protein L31B

Chain z

Ribosomal protein L19