IL_7Q0F_093
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- CCAAAUGCCUCG*CGCG
- Length
- 16 nucleotides
- Bulged bases
- 7Q0F|1|1|A|2259, 7Q0F|1|1|C|2265, 7Q0F|1|1|C|2284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0F_093 not in the Motif Atlas
- Geometric match to IL_5TBW_090
- Geometric discrepancy: 0.073
- The information below is about IL_5TBW_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66080.1
- Basepair signature
- cWW-cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7Q0F|1|1|C|2255
7Q0F|1|1|C|2256
7Q0F|1|1|A|2257
7Q0F|1|1|A|2258
7Q0F|1|1|A|2259
7Q0F|1|1|U|2260
7Q0F|1|1|G|2261
7Q0F|1|1|C|2262
7Q0F|1|1|C|2263
7Q0F|1|1|U|2264
7Q0F|1|1|C|2265
7Q0F|1|1|G|2266
*
7Q0F|1|1|C|2282
7Q0F|1|1|G|2283
7Q0F|1|1|C|2284
7Q0F|1|1|G|2285
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain AO
- 60S ribosomal protein eL41
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