IL_7Q0F_125
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UACGAAUAAG*CGCUGGA
- Length
- 17 nucleotides
- Bulged bases
- 7Q0F|1|1|A|3150, 7Q0F|1|1|A|3156, 7Q0F|1|1|U|3172, 7Q0F|1|1|G|3174
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0F_125 not in the Motif Atlas
- Geometric match to IL_5TBW_124
- Geometric discrepancy: 0.1179
- The information below is about IL_5TBW_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15174.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-cSS-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7Q0F|1|1|U|3149
7Q0F|1|1|A|3150
7Q0F|1|1|C|3151
7Q0F|1|1|G|3152
7Q0F|1|1|A|3153
7Q0F|1|1|A|3154
7Q0F|1|1|U|3155
7Q0F|1|1|A|3156
7Q0F|1|1|A|3157
7Q0F|1|1|G|3158
*
7Q0F|1|1|C|3169
7Q0F|1|1|G|3170
7Q0F|1|1|C|3171
7Q0F|1|1|U|3172
7Q0F|1|1|G|3173
7Q0F|1|1|G|3174
7Q0F|1|1|A|3175
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AG
- Ribosomal 60S subunit protein L33A
- Chain n
- 60S ribosomal protein L6
- Chain q
- Ribosomal 60S subunit protein L9B
- Chain u
- Ribosomal 60S subunit protein L14B
- Chain w
- Ribosomal 60S subunit protein L16A
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