IL_7Q0F_181
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UAC*GAAUA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0F_181 not in the Motif Atlas
- Geometric match to IL_4WF9_012
- Geometric discrepancy: 0.3982
- The information below is about IL_4WF9_012
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform; mini C-loop
- Motif group
- IL_24466.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
7Q0F|1|A|U|730
7Q0F|1|A|A|731
7Q0F|1|A|C|732
*
7Q0F|1|A|G|786
7Q0F|1|A|A|787
7Q0F|1|A|A|788
7Q0F|1|A|U|789
7Q0F|1|A|A|790
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain I
- 40S ribosomal protein S7
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain X
- 40S ribosomal protein S22-A
- Chain Y
- Ribosomal 40S subunit protein S23B
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