IL_7Q0F_185

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

GUUA*UC

Length

6 nucleotides

Bulged bases

7Q0F|1|A|U|804, 7Q0F|1|A|U|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0F_185 not in the Motif Atlas

Geometric match to IL_6JXM_001

Geometric discrepancy: 0.2231

The information below is about IL_6JXM_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_05670.1

Basepair signature

cWW-cWW

Number of instances in this motif group

9

Unit IDs

7Q0F|1|A|G|803
7Q0F|1|A|U|804
7Q0F|1|A|U|805
7Q0F|1|A|A|806
*
7Q0F|1|A|U|836
7Q0F|1|A|C|837

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain I

40S ribosomal protein S7

Chain z

Ribosomal protein L19