IL_7Q0F_215
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GCU*AUAGUC
- Length
- 9 nucleotides
- Bulged bases
- 7Q0F|1|A|U|1356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0F_215 not in the Motif Atlas
- Geometric match to IL_5AOX_001
- Geometric discrepancy: 0.2541
- The information below is about IL_5AOX_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.5
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 238
Unit IDs
7Q0F|1|A|G|1336
7Q0F|1|A|C|1337
7Q0F|1|A|U|1338
*
7Q0F|1|A|A|1355
7Q0F|1|A|U|1356
7Q0F|1|A|A|1357
7Q0F|1|A|G|1358
7Q0F|1|A|U|1359
7Q0F|1|A|C|1360
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain U
- Ribosomal 40S subunit protein S19A
- Chain V
- Ribosomal 40S subunit protein S20
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