IL_7Q0F_247

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

AC*GAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0F_247 not in the Motif Atlas

Homologous match to IL_8CRE_428

Geometric discrepancy: 0.0973

The information below is about IL_8CRE_428

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73108.3

Basepair signature

cWW-cWS-cSH-cWW

Number of instances in this motif group

25

Unit IDs

7Q0F|1|A|A|731
7Q0F|1|A|C|732
*
7Q0F|1|A|G|786
7Q0F|1|A|A|787
7Q0F|1|A|A|788
7Q0F|1|A|U|789

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain I

40S ribosomal protein S7

Chain M

Ribosomal 40S subunit protein S11A

Chain X

40S ribosomal protein S22-A

Chain Y

Ribosomal 40S subunit protein S23B