3D structure

PDB id
7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Candida albicans 80S ribosome in complex with anisomycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
UGAAG*UGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Q0P_031 not in the Motif Atlas
Geometric match to IL_5J7L_263
Geometric discrepancy: 0.0683
The information below is about IL_5J7L_263
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_50730.2
Basepair signature
cWW-tSH-tHS-tHS-cWW
Number of instances in this motif group
19

Unit IDs

7Q0P|1|1|U|830
7Q0P|1|1|G|831
7Q0P|1|1|A|832
7Q0P|1|1|A|833
7Q0P|1|1|G|834
*
7Q0P|1|1|U|851
7Q0P|1|1|G|852
7Q0P|1|1|G|853
7Q0P|1|1|A|854
7Q0P|1|1|G|855

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain AQ
Ribosomal 60S subunit protein L43A
Chain j
Ribosomal 60S subunit protein L2A
Chain z
Ribosomal protein L19

Coloring options:


Copyright 2026 BGSU RNA group. Page generated in 0.0902 s