IL_7Q0P_191

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GAC*GUUU

Length

7 nucleotides

Bulged bases

7Q0P|1|A|U|944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0P_191 not in the Motif Atlas

Geometric match to IL_3SJ2_002

Geometric discrepancy: 0.2385

The information below is about IL_3SJ2_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

7Q0P|1|A|G|853
7Q0P|1|A|A|854
7Q0P|1|A|C|855
*
7Q0P|1|A|G|942
7Q0P|1|A|U|943
7Q0P|1|A|U|944
7Q0P|1|A|U|945

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain O

Ribosomal 40S subunit protein S13

Chain c

40S ribosomal protein S27